Hardoim, P. R. et al. The hidden world inside crops: Ecological and evolutionary issues for outlining functioning of microbial endophytes. Microbiol. Mol. Biol. Rev. 79, 293–320 (2015).
Trivedi, P., Leach, J. E., Tringe, S. G., Sa, T. & Singh, B. Ok. Plant–microbiome interactions: From neighborhood meeting to plant well being. Nat. Rev. Microbiol. 18, 607–621 (2020).
Petrini, O. Fungal endophytes of tree leaves in Microbial Ecology of Leaves (eds. Andrews, J. H. & Hirano, S. S.) 179–197 (Springer, 1991).
Rodriguez, R. J., White, J. F. Jr., Arnold, A. E. & Redman, R. S. Fungal endophytes: Variety and practical roles. New Phytol. 182, 314–330 (2009).
Bamisile, B. S., Sprint, C. Ok., Akutse, Ok. S., Keppanan, R. & Wang, L. Fungal endophytes: Past herbivore administration. Entrance. Microbiol. 9, 544 (2018).
Rodriguez, R. J. et al. Stress tolerance in crops through habitat-adapted symbiosis. ISME J. 2, 404–416 (2008).
Solar, C. et al. Piriformospora indica confers drought tolerance in Chinese language cabbage leaves by stimulating antioxidant enzymes, the expression of drought-related genes and the plastid-localized CAS protein. J. Plant Physiol. 167, 1009–1017 (2010).
Arnold, A. E. Understanding the range of foliar endophytic fungi: Progress, challenges, and frontiers. Fungal Biol. Rev. 21, 51–66 (2007).
Peterson, R. L. & Massicotte, H. B. Exploring structural definitions of mycorrhizas, with emphasis on nutrient-exchange interfaces. Can. J. Bot. 82, 1074–1088 (2004).
Wilson, D. Endophyte: The evolution of a time period, and clarification of its use and definition. Oikos 73, 274 (1995).
Stone, J. Ok., Bacon, C. W. & White Jr, J. F. An outline of endophytic microbes: Endophytism outlined. in Microbial endophytes 3–29 (Bacon CW, White J, 2000).
Qian, X. et al. Leaf and root endospheres harbor decrease fungal variety and fewer complicated fungal co-occurrence patterns than rhizosphere. Entrance. Microbiol. 10, 1015 (2019).
Van Lê, A. et al. Ecophylogeny of the endospheric root fungal microbiome of co-occurring Agrostis stolonifera. PeerJ 5, e3454 (2017).
Błaszczyk, L., Salamon, S. & Mikołajczak, Ok. Fungi inhabiting the wheat endosphere. Pathogens 10, 1288 (2021).
Schwery, O. et al. As outdated because the mountains: The radiations of the Ericaceae. New Phytol. 207, 355–367 (2015).
Meharg, A. A. & Cairney, J. W. G. Co-evolution of mycorrhizal symbionts and their hosts to metal-contaminated environments. in Advances in Ecological Analysis vol. 30 69–112 (Elsevier, 1999).
Wang, B. & Qiu, Y.-L. Phylogenetic distribution and evolution of mycorrhizas in land crops. Mycorrhiza 16, 299–363 (2006).
Bradley, R., Burt, A. J. & Learn, D. J. Mycorrhizal an infection and resistance to heavy steel toxicity in Calluna vulgaris. Nature 292, 335–337 (1981).
Hazard, C., Gosling, P., Mitchell, D. T., Doohan, F. M. & Bending, G. D. Variety of fungi related to hair roots of ericaceous crops is affected by land use. FEMS Microbiol. Ecol. 87, 586–600 (2014).
Hamim, A. et al. Variety of fungal assemblages in roots of Ericaceae in two Mediterranean contrasting ecosystems. C. R. Biol. 340, 226–237 (2017).
Koizumi, T. & Nara, Ok. Communities of putative ericoid mycorrhizal fungi remoted from alpine dwarf shrubs in Japan: Results of host identification and microhabitat. Microbes Environ. 32, 147–153 (2017).
Zhang, Y. et al. Variety of root-associated fungi of Vaccinium mandarinorum alongside a human disturbance gradient in subtropical forests, China. J. Plant Ecol. 10, 56–66 (2017).
Yang, H. et al. Variety and traits of colonization of root-associated fungi of Vaccinium uliginosum. Sci. Rep. 8, 15283 (2018).
Newsham, Ok. Ok. A meta-analysis of plant responses to darkish septate root endophytes. New Phytol. 190, 783–793 (2011).
Lukešová, T., Kohout, P., Větrovský, T. & Vohník, M. The potential of darkish septate endophytes to kind root symbioses with ectomycorrhizal and ericoid mycorrhizal center European forest crops. PLoS ONE 10, e0124752 (2015).
Rimando, A. M., Kalt, W., Magee, J. B., Dewey, J. & Ballington, J. R. Resveratrol, pterostilbene, and piceatannol in Vaccinium Berries. J. Agric. Meals Chem. 52, 4713–4719 (2004).
Brody, A. Ok. et al. Genotype-specific results of ericoid mycorrhizae on floral traits and copy in Vaccinium corymbosum. Am. J. Bot. 106, 1412–1422 (2019).
Rayner, M. C. Obligate symbiosis in Calluna Vulgaris. Ann. Bot. os-29, 97–98 (1915).
Hou, L. W. et al. The phoma-like dilemma. Stud. Mycol. 96, 309–396 (2020).
Fehrer, J., Réblová, M., Bambasová, V. & Vohník, M. The basis-symbiotic Rhizoscyphus ericae combination and Hyaloscypha (Leotiomycetes) are congeneric: Phylogenetic and experimental proof. Stud. Mycol. 92, 195–225 (2019).
Pearson, V. & Learn, D. J. The biology of mycorrhiza within the ericaceae. II. The transport of carbon and phosphorus by the endophyte and the mycorrhiza. New Phytol. 72, 1325–1331 (1973).
Zhang, Y.-H.Z. Phylogenetic relationships of some members within the genus Hymenoscyphus (Ascomycetes, Helotiales). Nova Hedwig. 78, 475–484 (2004).
Vrålstad, T., Fossheim, T. & Schumacher, T. Piceirhiza bicolorata – the ectomycorrhizal expression of the Hymenoscyphus ericae combination?. New Phytol. 145, 549–563 (2000).
Vohník, M., Figura, T. & Réblová, M. Hyaloscypha gabretae and Hyaloscypha gryndleri spp. nov. (Hyaloscyphaceae, Helotiales), two new mycobionts colonizing conifer, ericaceous and orchid roots. Mycorrhiza 32, 105–122 (2022).
Villarreal-Ruiz, L., Anderson, I. C. & Alexander, I. J. Interplay between an isolate from the Hymenoscyphus ericae combination and roots of Pinus and Vaccinium. New Phytol. 164, 183–192 (2004).
Grelet, G.-A., Johnson, D., Paterson, E., Anderson, I. C. & Alexander, I. J. Reciprocal carbon and nitrogen switch between an ericaceous dwarf shrub and fungi remoted from Piceirhiza bicolorata ectomycorrhizas. New Phytol. 182, 359–366 (2009).
Vohník, M. et al. The cultivable endophytic neighborhood of Norway spruce ectomycorrhizas from microhabitats missing ericaceous hosts is dominated by ericoid mycorrhizal Meliniomyces variabilis. Fungal Ecol. 6, 281–292 (2013).
Vrålstad, T., Schumacher, T. & Taylor, A. F. S. Mycorrhizal synthesis between fungal strains of the Hymenoscyphus ericae combination and potential ectomycorrhizal and ericoid hosts. New Phytol. 153, 143–152 (2002).
Wang, C. J. Ok. & Wilcox, H. E. New species of ectendomycorrhizal and pseudomycorrhizal fungi: Phialophora Finlandia, Chloridium paucisporum and Phialocephala Fortinii. Mycologia 77, 951–958 (1985).
Leopold, D. R. Ericoid fungal variety: Challenges and alternatives for mycorrhizal analysis. Fungal Ecol. 24, 114–123 (2016).
Lacourt, I. et al. Nuclear ribosomal sequence evaluation of Oidiodendron: In direction of a redefinition of ecologically related species. New Phytol. 149, 565–576 (2001).
Baba, T. & Hirose, D. Sluggish-growing fungi belonging to the unnamed lineage in Chaetothyriomycetidae kind hyphal coils in very important ericaceous rhizodermal cells in vitro. Fungal Biol. 125, 1026–1035 (2021).
Vohník, M., Pánek, M., Fehrer, J. & Selosse, M.-A. Experimental proof of ericoid mycorrhizal potential inside Serendipitaceae (Sebacinales). Mycorrhiza 26, 831–846 (2016).
Vohník, M. et al. Novel root-fungus symbiosis in ericaceae: Sheathed ericoid mycorrhiza shaped by a hitherto undescribed basidiomycete with affinities to trechisporales. PLoS ONE 7, e39524 (2012).
Zhang, Y. et al. Root-associated fungi of Vaccinium carlesii in subtropical forests of China: Intra- and inter-annual variability and impacts of human disturbances. Sci. Rep. 6, 22399 (2016).
Yurgel, S. N., Douglas, G. M., Dusault, A., Percival, D. & Langille, M. G. I. Dissecting neighborhood construction in wild blueberry root and soil microbiome. Entrance. Microbiol. 9, 1187 (2018).
Zhang, Y., Tang, F., Ni, J., Dong, L. & Solar, L. Variety of root-associated fungi of Rhododendron simsii in subtropical forests: fungal communities with excessive resistance to anthropogenic disturbances. J. For. Res. 30, 2321–2330 (2019).
Li, J. et al. Comparative evaluation of rhizosphere microbiomes of Southern Highbush Blueberry (Vaccinium corymbosum L.), Darrow’s blueberry (V. darrowii Camp), and Rabbiteye blueberry (V. virgatum Aiton). Entrance. Microbiol. 11, 370 (2020).
Morvan, S., Meglouli, H., Lounès-Hadj Sahraoui, A. & Hijri, M. Into the wild blueberry (Vaccinium angustifolium) rhizosphere microbiota. Environ. Microbiol. 22, 3803–3822 (2020).
Petrini, O. Endophytic fungi in British Ericaceae: A preliminary examine. Trans. Br. Mycol. Soc. 83, 510–512 (1984).
Li, Z.-J., Shen, X.-Y. & Hou, C.-L. Fungal endophytes of South China blueberry (Vaccinium dunalianum var. urophyllum). Lett. Appl. Microbiol. 63, 482–487 (2016).
Koudelková, B., Jarošová, R. & Koukol, O. Are endophytic fungi from Rhododendron tomentosum preadapted for its important oil?. Biochem. Syst. Ecol. 75, 21–26 (2017).
Martino, E. et al. Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists. New Phytol. 217, 1213–1229 (2018).
Schlegel, M. et al. Globally distributed root endophyte Phialocephala subalpina hyperlinks pathogenic and saprophytic existence. BMC Genomics 17, 1015 (2016).
Fang, Ok. et al. Tissue-specific and geographical variation in endophytic fungi of Ageratina adenophora and fungal associations with the setting. Entrance. Microbiol. 10, 2919 (2019).
Bálint, M. et al. Host genotype shapes the foliar fungal microbiome of balsam poplar (Populus balsamifera). PLoS ONE 8, e53987 (2013).
Toju, H., Kurokawa, H. & Kenta, T. Elements influencing leaf- and root-associated communities of micro organism and fungi throughout 33 plant orders in a grassland. Entrance. Microbiol. 10, 241 (2019).
Vasquez, P. et al. First report of blueberry botrytis blight in Buenos Aires, Entre Ríos, and Córdoba, Argentina. Plant Dis. 91, 639–639 (2007).
Hamonts, Ok. et al. Discipline examine reveals core plant microbiota and relative significance of their drivers. Environ. Microbiol. 20, 124–140 (2018).
Grünig, C. R., Queloz, V., Sieber, T. N. & Holdenrieder, O. Darkish septate endophytes (DSE) of the Phialocephala fortinii s.l.—Acephala applanata species complicated in tree roots: classification, inhabitants biology, and ecology. Botany 86, 1355–1369 (2008).
Vohník, M. Ericoid mycorrhizal symbiosis: Theoretical background and strategies for its complete investigation. Mycorrhiza 30, 671–695 (2020).
Knapp, D. G. et al. Comparative genomics gives insights into the life-style and divulges practical heterogeneity of darkish septate endophytic fungi. Sci. Rep. 8, 6321 (2018).
Yang, Y. et al. Genomic traits and comparative genomics evaluation of the endophytic fungus Sarocladium brachiariae. BMC Genomics 20, 782 (2019).
Alibrandi, P., Schnell, S., Perotto, S. & Cardinale, M. Variety and construction of the endophytic bacterial communities related to three terrestrial orchid species as revealed by 16S rRNA gene metabarcoding. Entrance. Microbiol. 11, 604964 (2020).
Hodgson, S. et al. Vertical transmission of fungal endophytes is widespread in forbs. Ecol. Evol. 4, 1199–1208 (2014).
Selosse, M.-A., Schneider-Maunoury, L. & Martos, F. Time to re-think fungal ecology? Fungal ecological niches are sometimes prejudged. New Phytol. 217, 968–972 (2018).
Zhang, J., Kobert, Ok., Flouri, T. & Stamatakis, A. PEAR: A quick and correct Illumina Paired-Finish reAd mergeR. Bioinforma. Oxf. Engl. 30, 614–620 (2014).
Caporaso, J. G. et al. QIIME permits evaluation of high-throughput neighborhood sequencing knowledge. Nat. Strategies 7, 335–336 (2010).
Edgar, R. C. Search and clustering orders of magnitude quicker than BLAST. Bioinforma. Oxf. Engl. 26, 2460–2461 (2010).
Rognes, T., Flouri, T., Nichols, B., Quince, C. & Mahé, F. VSEARCH: A flexible open supply instrument for metagenomics. PeerJ 4, e2584 (2016).
Abarenkov, Ok. et al. Full UNITE+INSD dataset for Fungi. (2021) https://doi.org/10.15156/BIO/1281531.
Altschul, S. F., Gish, W., Miller, W., Myers, E. W. & Lipman, D. J. Primary native alignment search instrument. J. Mol. Biol. 215, 403–410 (1990).
Ronquist, F. & Huelsenbeck, J. P. MrBayes 3: Bayesian phylogenetic inference below combined fashions. Bioinforma. Oxf. Engl. 19, 1572–1574 (2003).
Kumar, S., Stecher, G., Li, M., Knyaz, C. & Tamura, Ok. MEGA X: Molecular evolutionary genetics evaluation throughout computing platforms. Mol. Biol. Evol. 35, 1547–1549 (2018).
Wei, X., Chen, J., Zhang, C. & Pan, D. A New Oidiodendron maius Pressure Remoted from Rhododendron fortunei and its Results on Nitrogen Uptake and Plant Progress. Entrance. Microbiol. 7 (2016).
Chong, J., Liu, P., Zhou, G. & Xia, J. Utilizing MicrobiomeAnalyst for complete statistical, practical, and meta-analysis of microbiome knowledge. Nat. Protoc. 15, 799–821 (2020).
Comments
0 comments